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Protocols

LONI-IDA specifications

Information


Unique identifier OMICS_13882
Name LONI-IDA
Alternative name Laboratory of Neuro Imaging Image and Data Archive
Restrictions to use None
Community driven No
Data access Application programming interface
User data submission Allowed
Maintained Yes

Publications for Laboratory of Neuro Imaging Image and Data Archive

LONI-IDA citations

 (5)
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The effect of the top 20 Alzheimer disease risk genes on gray matter density and FDG PET brain metabolism

2016
PMCID: 5198883
PMID: 28054028
DOI: 10.1016/j.dadm.2016.12.003
call_split See protocol

[…] preprocessing protocols can be found on www.adni-info.org. ADNI MRI data acquisition and preprocessing have been previously described elsewhere , , . Briefly, we downloaded preprocessed MRI data from LONI IDA (https://ida.loni.usc.edu) . Seven hundred eighty-five subjects had 3T scans available, and for the remaining 715 subjects, we used 1.5T data. MRI field strength was included as a covariate i […]

library_books

Data Citation in Neuroimaging: Proposed Best Practices for Data Identification and Attribution

2016
Front Neuroinform
PMCID: 4981598
PMID: 27570508
DOI: 10.3389/fninf.2016.00034

[…] is dependent upon the selection of data sharing platform. In general, there are three broad types of hosting options: central repositories (such as NITRC-IR (Kennedy et al., ), COINS Landis et al., , LONI IDA Crawford et al., , XNAT Central Marcus et al., , etc.), institutional repositories (such as [email protected]), or a personal repository (on an individual or laboratory website). In order to […]

call_split

Incorporating and Compensating Cerebrospinal Fluid in Surface Based Forward Models of Magneto and Electroencephalography

2016
PLoS One
PMCID: 4966911
PMID: 27472278
DOI: 10.1371/journal.pone.0159595
call_split See protocol

[…] www.humanconnectome.org/documentation/MGH-diffusion), and corresponding datasets and detailed acquisition parameters are publicly available through the Laboratory of Neuro Imaging Image Data Archive (LONI IDA, https://ida.loni.usc.edu) and the WU-Minn Connectome Database (ConnecomeDB, https://db.humanconnectome.org).The segmentation and meshing for Head 2 was done using the same pipeline as for He […]

library_books

TheHiveDB image data management and analysis framework

2014
Front Neuroinform
PMCID: 3880907
PMID: 24432000
DOI: 10.3389/fninf.2013.00049

[…] s has led to a growing need for an integrated brain imaging database, resource, data, and activity management system. A number of imaging databases have been described in the literature including the LONI IDA (), Loris (), and XNAT () systems. Each of these databases represent attempts to create a system capable of jointly managing the increasing amounts of imaging data and data from other sources […]

library_books

Visual Systems for Interactive Exploration and Mining of Large Scale Neuroimaging Data Archives

2012
Front Neuroinform
PMCID: 3332235
PMID: 22536181
DOI: 10.3389/fninf.2012.00011

[…] as well.In summary, by using INVIZIAN users can quickly and easily explore and interact with hundreds and even thousands of representations of brain imaging data from large-scale archives such as the LONI IDA and other resources. The example of healthy, AD, and MCI subjects used here, taken from across multiple neuroimaging project contained in the same large-scale archive, demonstrates the functi […]

Citations

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LONI-IDA institution(s)
Laboratory of Neuro Imaging, USC Mark and Mary Stevens Neuroimaging and Informatics Institute, University of Southern California, Los Angeles, CA, USA
LONI-IDA funding source(s)
This work was supported by the National Institutes of Health (grants n°1U54EB020406-01, EB015922, W81XWH-12-2-0012, W81XWH-13-1-0259 and U01 NS086090), the Parkinson's Progression Markers Initiative of the Michael J. Fox Foundation for Parkinson's Research, and Alzheimer's Disease Neuroimaging Initiative (ADNI) (National Institutes of Health Grant U01 AG024904).

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