LoopTK specifications

Information


Unique identifier OMICS_08522
Name LoopTK
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Peggy Yao <>

Publication for LoopTK

LoopTK in publication

PMCID: 4624436
PMID: 26506617
DOI: 10.1371/journal.pcbi.1004507

[…] structures factors were obtained from the protein data bank []. qfit uses the following libraries: ibm’s ilog cplex solver for qp and miqp, which is available free of charge for academic use, and looptk for inverse kinematics calculations []. qfit is implemented in parallel; it is capable of sampling and evaluating conformations for each residue as an independent job on a linux cluster. […]


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LoopTK institution(s)
Computer Science Department, Stanford University, Stanford, CA, USA

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