LS-GKM statistics

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Citations per year

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Tool usage distribution map

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Associated diseases

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LS-GKM specifications

Information


Unique identifier OMICS_20454
Name LS-GKM
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C, C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Dongwon Lee <>

Publication for LS-GKM

LS-GKM in publication

PMCID: 5838836
PMID: 29618048
DOI: 10.1093/gigascience/gix136

[…] compare the similarity between different tissues. strong enrichment of brain, muscle, and liver tissues was observed., additional file 6: figure s6: large-scale gapped k-mer support vector machine (ls-gkm-svm) scores for enhancers and deltasvm scores for snps. a, the ls-gkm-svm model was used to calculate the gkm-svm scores for all enhancers in the villar dataset. red, enhancers scored […]


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LS-GKM institution(s)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, MD, USA
LS-GKM funding source(s)
Supported by NIH grants HL128782, HL086694 and GM104469.

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