LSC pipeline

LSC specifications


Unique identifier OMICS_05094
Name LSC
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Pacific Biosciences
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes


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  • person_outline Wing Hung Wong <>

Publication for LSC

LSC IN pipeline

PMCID: 5553090
PMID: 28868132
DOI: 10.5256/f1000research.11392.r19894

[…] in the end of first paragraph, right column, page 10, the word “corrected”/”correction” means the sequencing long reads that are corrected by short reads using error-correction software (e.g., lsc). we have added some annotation for table 2 for better understanding. , ht (3c):  a similar statement is true for figure 5 and the corresponding text (“when using long reads only”): […]

LSC institution(s)
Department of Statistics, Stanford University, Stanford, CA, USA; Pacific Biosciences of California, Menlo Park, CA, USA
LSC funding source(s)
This work was supported by the National Institutes of Health [R01HG005717 and R01HD057970].

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