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Citations per year

Number of citations per year for the bioinformatics software tool LSX

Tool usage distribution map

This map represents all the scientific publications referring to LSX per scientific context
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LSX specifications


Unique identifier OMICS_23980
Name LSX
Alternative names Locus Specific Sequence Subsampling, LS3 (Locus Specific Sequence Subsampling), LS4 (Locus Specific Sequence Subsampling Supplement)
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R, Shell (Bash)
Computer skills Medium
Version 1.1
Stability Stable
Maintained Yes




No version available



  • person_outline Juan Montoya-Burgos

Publication for Locus Specific Sequence Subsampling

LSX citation


LS³: A Method for Improving Phylogenomic Inferences When Evolutionary Rates Are Heterogeneous among Taxa

Mol Biol Evol
PMCID: 4868118
PMID: 26912812
DOI: 10.1093/molbev/msw043

[…] axon was effective in reducing the heterogeneity of lineage evolutionary rates.Here, we present one such criterion that was employed in a sequence data exploration algorithm that we developed called “Locus Specific Sequence Subsampling” (LS³), which aims to reduce LBA artifacts in phylogenetic inferences. This algorithm extends and refines the approach proposed by and automatically identifies, fo […]

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LSX institution(s)
Department of Genetics and Evolution, University of Geneva, Geneva, Switzerland; Institute of genetics and genomics in Geneva (iGE3), University of Geneva, Geneva, Switzerland
LSX funding source(s)
Supported by the Swiss National Science Foundation (grant 31003A_141233) and the Institute for Genetics and Genomics in Geneva (iGE3).

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