LumiWCluster statistics

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Citations per year

Number of citations per year for the bioinformatics software tool LumiWCluster

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LumiWCluster specifications


Unique identifier OMICS_18710
Name LumiWCluster
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.0
Stability Beta
Source code URL
Maintained Yes




No version available



  • person_outline Pei Fen Kuan

Publication for LumiWCluster

LumiWCluster citation


Comprehensive Analysis of DNA Methylation in Head and Neck Squamous Cell Carcinoma Indicates Differences by Survival and Clinicopathologic Characteristics

PLoS One
PMCID: 3554647
PMID: 23358896
DOI: 10.1371/journal.pone.0054742

[…] site in HPV(+) and HPV(−) tumors. The effects of clinical characteristics on DNA CpG methylation measured on the Goldengate array were examined using Limma in R 2.10.1 . Sample weights generated with LumiWCluster based on detection p-values across samples were used in the lmFit function from the Limma package to downweight samples with higher detection p-values. CpG sites were identified as differ […]

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LumiWCluster institution(s)
Department of Biostatistics, Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA; Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, WI, USA; Division of Biostatistics, University of Minnesota, Minneapolis, MN, USA
LumiWCluster funding source(s)
Supported by NCI (grants 5-P30-CA16086-34 and 1R21CA134368- 01A1); Susan G. Komen Foundation (grant KG081397).

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