MACSIMS specifications

Information


Unique identifier OMICS_26387
Name MACSIMS
Alternative name Multiple Alignment of Complete Sequences Information Management System
Software type Toolkit/Suite
Interface Web user interface
Restrictions to use None
Input data Some multiple alignments.
Input format FASTA,MSF,ClustalW
Output data An alignment.
Output format XML
Computer skills Basic
Stability Stable
Maintained Yes
Wikipedia http://lbgi.fr/wikili/index.php/MACSIMS

Maintainers


This tool is not available anymore.

Additional information


http://www.lbgi.fr/~julie/MACSIMS/Documentation/

Information


Unique identifier OMICS_26387
Name MACSIMS
Alternative name Multiple Alignment of Complete Sequences Information Management System
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data Some multiple alignments.
Input format FASTA,MSF,ClustalW
Output data An alignment.
Output format XML
Operating system Unix/Linux
Programming languages Shell (Bash)
Computer skills Advanced
Stability Stable
Requirements SRS system, Secator, NCOILS
Maintained No
Wikipedia http://lbgi.fr/wikili/index.php/MACSIMS

Versioning


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Maintainers


This tool is not available anymore.

Additional information


http://www.lbgi.fr/~julie/MACSIMS/Documentation/

Publication for Multiple Alignment of Complete Sequences Information Management System

MACSIMS institution(s)
Laboratoire de Biologie et Genomique Structurales, Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France; The Laboratory of Molecular Biology, Genetic Analysis & Modelling, Luxembourg; Post Genomics & Molecular Interactions Centre, School of Life Sciences, University of Dundee, UK
MACSIMS funding source(s)
Supported by the UK BBSRC (Biotechnology and Biological Sciences Research Council: BBS/B/16542), institute funds from the Institut National de la Santé et de la Recherche Medicale, the Centre National de la Recherche Scientifique, the Hopital Universitaire de Strasbourg, the Fond National de la Science (GENOPOLE) and the SPINE project (E.C. contract number QLG2-CT-2002-00988).

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