MacVector pipeline

MacVector specifications

Information


Unique identifier OMICS_08914
Name MacVector
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Mac OS
License Commercial
Computer skills Medium
Version 13.5
Stability Stable
Maintained Yes

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Publication for MacVector

MacVector IN pipelines

 (40)
2016
PMCID: 4780071
PMID: 26946957
DOI: 10.1038/srep22663

[…] of retrogen inc. (san diego, ca, usa). online bioinformatics server expasy was used to convert the dna sequences to amino acids., peptide sequence data was aligned and dendrograms constructed using macvector protein sequence analysis software (eastman chemical co., new haven, ct, usa). homology analysis was carried out using blastp (ncbi) and sequence alignments using clustalw2 […]

2016
PMCID: 4884065
PMID: 27053665
DOI: 10.1091/mbc.E15-09-0655

[…] alignment by using the program mafft. the phylogenetic tree was built with the neighbor-joining method using c. elegans sequence as outgroup; bootstrap analysis was performed using the program macvector, the nin-rb orf was cloned into the pawg and pmt/v5-his expression vectors for expression in drosophila kc167 cells and s2 cells, respectively. transfections were performed […]

2015
PMCID: 4489675
PMID: 26133557
DOI: 10.1371/journal.pone.0131974

[…] and 5′-aag gag gtg atc cag ccg ca-3′, respectively [27]. the fragment was sequenced at shanghai sangon biological engineering technology & services co., ltd. the sequence was analyzed using macvector software (oxford molecular, oxford, uk), and was registered in the genbank database (jn896750). blast search using the 16s rdna sequence as a query was performed against the genbank […]

2015
PMCID: 5098238
PMID: 25657015
DOI: 10.1111/pbi.12334

[…] previously (gibbs et al., 2011, 2014b)., basic local alignment search tool (blast) (altschul et al., 1990) analysis was carried out to identify the barley orthologue of prt6. clustalw as part of the macvector program (macvector, cambridge, uk) was used for multiple sequence alignments and to identify barley erfviis from the predicted proteome derived from the barley genome sequence (mayer et al., […]

2015
PMCID: 5098238
PMID: 25657015
DOI: 10.1111/pbi.12334

[…] et al., 2011, 2014b)., basic local alignment search tool (blast) (altschul et al., 1990) analysis was carried out to identify the barley orthologue of prt6. clustalw as part of the macvector program (macvector, cambridge, uk) was used for multiple sequence alignments and to identify barley erfviis from the predicted proteome derived from the barley genome sequence (mayer et al., 2012). for rnai si […]

MacVector institution(s)
Oxford Molecular Group, Campbell, CA, USA

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