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MacVector specifications

Information


Unique identifier OMICS_08914
Name MacVector
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Mac OS
License Commercial
Computer skills Medium
Version 13.5
Stability Stable
Maintained Yes

Versioning


No version available

Publication for MacVector

MacVector citations

 (307)
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Recurrent hotspot mutations in HRAS Q61 and PI3K AKT pathway genes as drivers of breast adenomyoepitheliomas

2018
Nat Commun
PMCID: 5940840
PMID: 29739933
DOI: 10.1038/s41467-018-04128-5
call_split See protocol

[…] ACT or Sanger sequencing, using the primers and methods described in Piscuoglio et al.. Sequencing reactions were performed in triplicate, and both the forward and reverse strands were analyzed using MacVector software. […]

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Initial characterisation of adult human ovarian cell populations isolated by DDX4 expression and aldehyde dehydrogenase activity

2018
Sci Rep
PMCID: 5934371
PMID: 29725036
DOI: 10.1038/s41598-018-25116-1
call_split See protocol

[…] instructions; ≤ 2 µg of RNA was used per cDNA synthesis. PCR was performed using Taq DNA Polymerase (Qiagen, Manchester, UK) according to the manufacturer’s instructions. Primers were designed using MacVector7.2 (Table ). For controls, RNA was extracted from cell suspensions of dissociated human ovarian tissue and rodent skeletal muscle using the protocols described above. A positive control was […]

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Molecular, phylogenetic and developmental analyses of Sall proteins in bilaterians

2018
PMCID: 5892016
PMID: 29644029
DOI: 10.1186/s13227-018-0096-z
call_split See protocol

[…] were also retrieved from the NCBI databases using keyword search (Schnurri) and tblastn and pblast search using the Sal-box motif as template. Translation into protein sequences was carried out using MacVector version 12.7 [], assuming standard codon usage. […]

library_books

Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis

2018
PMCID: 5901230
PMID: 29615241
DOI: 10.1016/j.vetmic.2018.02.019

[…] ne (accession AIA09380) from the capsule export locus, common to all serovars. The identified loci were analyzed using BLASTn and BLASTx. Multiple sequence alignments were performed using ClustalW in MacVector v15.5.2. Genes encoding Apx toxin biosynthetic and export proteins were also identified by BLASTn using sequences of apxICABD and apxIICA from the L20 genome (accession number CP000569), and […]

library_books

Evolution of echovirus 11 in a chronically infected immunodeficient patient

2018
PLoS Pathog
PMCID: 5875893
PMID: 29554133
DOI: 10.1371/journal.ppat.1006943

[…] Neighbor-joining phylogenetic comparisons were prepared by Clustal X in MEGA v5.22 [] or MacVector software using the Tamura-Nei substitution model []. Separate analyses were prepared for near-complete sequences with 5'-ends trimmed to the longest sequence common to all sequences in the a […]

call_split

Contribution of Bicarbonate Assimilation to Carbon Pool Dynamics in the Deep Mediterranean Sea and Cultivation of Actively Nitrifying and CO2 Fixing Bathypelagic Prokaryotic Consortia

2018
Front Microbiol
PMCID: 5780414
PMID: 29403458
DOI: 10.3389/fmicb.2018.00003
call_split See protocol

[…] mplified sequences and close relatives identified with BLAST (Altschul et al., ) were created using the ARB and SILVA alignment tools (Ludwig et al., ; Pruesse et al., ). MEGA 5 (Tamura et al., ) and MacVector 11.1.2 were used to align sequences of amoA and hbd functional genes. After alignment, the neighbor-joining algorithm of ARB and MEGA 5 program packages were used to generate the phylogeneti […]

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MacVector institution(s)
Oxford Molecular Group, Campbell, CA, USA

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