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MAFFT

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A popular multiple sequence alignment (MSA) program with various options for the progressive method, the iterative refinement method and other methods. MAFFT version 7 has several new features, including options for adding unaligned sequences into an existing alignment, adjustment of direction in nucleotide alignment, constrained alignment and parallel processing, which were implemented after the previous major update. MAFFT is also available for unix-like operating systems (http://mafft.cbrc.jp/alignment/software/).

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1 user review

Sayoni Das's avatar image Sayoni Das's country flag

Sayoni Das

Very efficient, well-documented and easy to use MSA tool

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MAFFT classification

MAFFT specifications

Interface:
Web user interface
Computer skills:
Basic
Stability:
Stable
Restrictions to use:
None
Version:
7.0
Maintained:
Yes

MAFFT support

Documentation

Maintainer

  • Kazutaka Katoh <>

Credits

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Publications

Institution(s)

Immunology Frontier Research Center, Osaka University, Suita, Osaka, Japan; Computational Biology Research Center, The National Institute of Advanced Industrial Science and Technology, Tokyo, Japan

Funding source(s)

This work was supported by Platform for Drug Discovery, Informatics, and Structural Life Science from the Ministry of Education, Culture, Sports, Science and Technology, Japan, and the Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Japan.

Link to literature

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