MagicViewer protocols

MagicViewer specifications

Information


Unique identifier OMICS_00887
Name MagicViewer
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained No

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Publication for MagicViewer

MagicViewer IN pipeline

2017
PMCID: 5243127
PMID: 28099493
DOI: 10.1371/journal.pone.0170011

[…] identified using soapsnp and gatk programs. subsequently, the reads were realigned to the reference genome using bwa. the identified snps and indels were annotated using the exome-assistant program. magicviewer was used to view the short read alignments and validate the candidate snps and indels. the variants detected by targeted next-generation sequencing were confirmed by sanger sequencing. […]

MagicViewer institution(s)
Institute of Genomic Medicine, Wenzhou Medical College, Wenzhou, China; Center for Comparative Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Pennsylvania State University, PA, USA; School of Pharmaceutical Science/Zhejiang Provincial Key Laboratory of Biotechnology Pharmaceutical Engineering, Wenzhou Medical College, Wenzhou; Behavioral Genetics Center, Institute of Psychology, Chinese Academy of Science, Beijing, China

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