MAIA specifications

Information


Unique identifier OMICS_09316
Name MAIA
Alternative name Multiple Assembly IntegrAtor
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Version 0.5
Stability No
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for Multiple Assembly IntegrAtor

MAIA citation

library_books

Approaches for in silico finishing of microbial genome sequences

2017
Genet Mol Biol
PMCID: 5596377
PMID: 28898352
DOI: 10.1590/1678-4685-GMB-2016-0230

[…] ns that have possibly suffered compression or expansion due to assembly errors in repetitive DNA sequences. The source code of Reconciliator is available from the URL http://www.genome.umd.edu/.MAIA (Multiple Assembly Integrator) (): uses the overlap-layout-consensus paradigm in a similar way to Minimus to construct a graph based on the overlaps identified by MUMmer (). The connections in the grap […]

MAIA institution(s)
The Delft Bioinformatics Lab, Department of Mediamatics, Delft University of Technology, CD Delft; Industrial Microbiology Group, Department of Biotechnology, Delft University of Technology, BC Delft; Kluyver Centre for Genomics of Industrial Fermentation, GA Delft; Network Architectures and Services, Department of Telecommunications, Delft University of Technology, CD Delft; Netherlands Bioinformatics Center, HB Nijmegen, Netherlands
MAIA funding source(s)
This project was carried out within the research programme of the Kluyver Centre for Genomics of Industrial Fermentation which is part of the Netherlands Genomics Initiative/Netherlands Organization for Scientific Research.

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