MALISAM specifications


Unique identifier OMICS_09333
Alternative name Manual ALIgnments for Structurally Analogous Motifs
Restrictions to use None
Maintained Yes

Publication for Manual ALIgnments for Structurally Analogous Motifs

MALISAM citation


How a Spatial Arrangement of Secondary Structure Elements Is Dispersed in the Universe of Protein Folds

PLoS One
PMCID: 4171485
PMID: 25243952
DOI: 10.1371/journal.pone.0107959

[…] ams for reproducing reference alignments created by human experts . For example, the SQ search scheme of MICAN reproduced the reference alignments obtained in a benchmark test set of the MALIDUP and MALISAM databases with accuracies of 89.3% and 79.3%, respectively. The reference alignments in these two databases were carefully inspected and manually curated to ensure good alignment quality by c […]

MALISAM institution(s)
Howard Hughes Medical Institute; Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX, USA
MALISAM funding source(s)
This work was supported by NIH grant GM67165.

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