1. Directory
  2. Genomics
  3. Genome annotation
  4. Repetitive DNA
Join community Sign in
By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.
Mammalian Promoter Database / MPromDb screenshot

Integrates gene promoters with experimentally supported annotation of transcription start sites, cis-regulatory elements, CpG islands and chromatin immunoprecipitation microarray (ChIP-chip) experimental results with intuitively designed presentation. Users can search the database based on gene id/symbol, or by specific tissue/cell type and filter results based on any combination of tissue/cell specificity, Known/Novel, CpG/NonCpG, and protein-coding/non-coding gene promoters.

Specifications

Restrictions to use:
None
Version:
MPromDb version 2.1
View all reviews

0 user reviews

No review has been posted.

View all issues

0 issues

No open issue.

Documentation & support

Maintainer

  • Ravi Gupta <rgupta at wistar.org>

Credits

Institution(s)

Department of Molecular Virology, Immunology and Medical Genetics, Human Cancer Genetics Program, Comprehensive Cancer Center, The Ohio Stage University 420 W 12th Avenue, TMRF 524, Columbus, OH 43210, USA

Publications

  • (Gupta et al., 2011) MPromDb update 2010: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-seq experimental data. Nucleic acids research 39, D92-97.
    PMID: 21097880
  • (Sun et al., 2006) MPromDb: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-chip experimental data. Nucleic acids research.
    PMID: 16381984

Classification

  • Animals
    • Homo sapiens

76 related tools