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|Alternative name||Genetic Map Comparison|
|Interface||Command line interface|
|Restrictions to use||None|
|Programming languages||Python, R, Shell (Bash)|
|License||GNU General Public License version 3.0|
No version available
- person_outline Ben Sutherland
Publication for Genetic Map Comparison
Genome wide analysis of GRAS transcription factor gene family in Gossypium hirsutum L.
[…] fied five types of gene duplication events with MCScanX using the GRAS protein sequences and the position data in chromosomes . Additionally, we made a diagram of the chromosomal locations with the MapInspect software . […]
Genome wide analysis of family 1 UDP glycosyltransferases (UGT) and identification of UGT genes for FHB resistance in wheat (Triticum aestivum L.)
[…] The genetic location of each UGT on the chromosomes was retrieved from the final TGACv1 map . The genetic map of each UGT on the chromosome was modified from the primary map drawn by the MapInspect tool (http://mapinspect.software.informer.com/). […]
Molecular Characterization, Evolution, and Expression Profiling of the Dirigent (DIR) Family Genes in Chinese White Pear (Pyrus bretschneideri)
[…] In order to clarify the distribution of PbDIRs on 17 chromosomes of pear, MapInspect software was used to map PbDIRs on the chromosome (Supplementary Figure ). It can be found that except for PbDIR25 and PbDIR27 have not been mapped on specific chromosomes, the remaining 33 […]
Duplication and diversification of lectin receptor like kinases (LecRLK) genes in soybean
[…] he putative genes and the chromosome lengths of each soybean chromosome were obtained from the Phytozome database. Then, an image of the chromosomal location of each GmLecRLK gene was generated using MapInspect software (http://mapinspect.software.informer.com/). As in previous literature, a tandem duplication cluster was defined as a region containing two or more genes within 200 kb,,. Furthermor […]
Genome wide comparative and evolutionary analysis of Calmodulin binding Transcription Activator (CAMTA) family in Gossypium species
[…] f all Gossypium CAMTA genes on chromosomes were obtained through BLASTN search against the Cotton Genome project and Phytozome databases. All Gossypium CAMTA genes were mapped on the chromosome using Mapinspect software.The paralogous CAMTA genes were identified in G. arboreum, G. raimondii, and G. hirsutum by using reciprocal blast with e-value < 10−5 to understand the evolutionary mechanism of C […]
Genome wide identification of wheat (Triticum aestivum) expansins and expansin expression analysis in cold tolerant and cold sensitive wheat cultivars
[…] am (http://bioinf.uni-greifswald.de/augustus/submission.php)  and the GSDS 2.0 program (http://gsds.cbi.pku.edu.cn/)  were used to predict the exon–intron structures. Map Inspect software (http://mapinspect.software.informer.com/) was used to analyze the genic physical location on chromosomes. Cis-acting elements analysis in the 2 -kb upstream regions was performed with PlantCARE (http://bioin […]
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