mapexr specifications


Unique identifier OMICS_25843
Name mapexr
Alternative name MAPEX
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format BAM, VCF, BAI
Output format TXT
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License MIT License
Computer skills Advanced
Version 0.1.0
Stability Stable
GenomicRanges, Rsamtools, GenomicAlignments, blastn, mapexr
Maintained Yes


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  • person_outline Brian Mannakee <>
  • person_outline Ryan Gutenkunst <>
  • person_outline Erik Knudsen <>

Publication for mapexr

mapexr institution(s)
Department of Epidemiology and Biostatistics, Mel and Enid Zuckerman College of Public Health, University of Arizona, Tucson, AZ, USA; University of Arizona Cancer Center, University of Arizona, Tucson, AZ, USA; McDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, TX, USA; Department of Medicine, University of Arizona, Tucson, AZ, USA; Department of Pathology, University of Arizona, Tucson, Arizona, USA; Department of Molecular and Cellular Biology, University of Arizona, Tucson, AZ, USA
mapexr funding source(s)
Supported by the National Science Foundation via Graduate Research Fellowship DGE-1143953 and by the National Institutes of Health via grants R01CA211878-01 and P30CA023074-36S2.

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