Mapix protocols

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Mapix specifications

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Unique identifier OMICS_00844
Name Mapix
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux, Windows
License Commercial
Computer skills Medium
Stability Stable
Maintained Yes

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Mapix in pipelines

 (2)
2014
PMCID: 4111601
PMID: 25061880
DOI: 10.1371/journal.pone.0103525

[…] system for 17 hours at 56°c. the hybridized arrays were washed, fixed and scanned on innoscan 700 microarray scanner (innopsys, carbonne, france). the digitized images were captured and analysed by mapix®4.5 (innopsys, carbonne, france) microarray image analysis software., gene ontology (go) analysis for differentially expressed mrna (log2 transformed, signal log ratio (slr)>1 or slr<−1 […]

2013
PMCID: 3694381
PMID: 23841104
DOI: 10.1155/2013/589451

[…] targets and 1,082 experimental control probes. the slides were scanned using innoscan 700 (innopsys, carbonne, france) at 5 μm resolution. artefacts were masked, and raw data were extracted using mapix (innopsys, carbonne, france)., microarray data processing and statistical analysis of differential gene expression was performed using the limma package in the r statistical environment […]


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Mapix in publications

 (49)
PMCID: 5871881
PMID: 29593268
DOI: 10.1038/s41467-018-03663-5

[…] for 1 h at room temperature. slide scanning to detect bound ha was conducted using an innoscan1100al (innopsys) fluorescent microarray scanner. fluorescent signal intensity was measured using mapix (innopsys) and mean intensity minus mean background of 4 replicate spots was calculated. a complete list of the glycans on the array is presented in supplementary fig. ., normal ferret sera […]

PMCID: 5755288
PMID: 29304809
DOI: 10.1186/s12936-017-2170-8

[…] igg (10 ng/µl, invitrogen, carlsbad, ca, usa) in pbs-t was used as the detection antibody and the signals were detected in a fluorescence scanner (innoscan 300, innopsys, carbonne, france). the mapix software was used for data acquisition and analysis. all samples were duplicated in the same slides. mean values of two mean fluorescence intensity (mfi) were calculated., to assess the cross […]

PMCID: 5736695
PMID: 29259314
DOI: 10.1038/s41598-017-17850-9

[…] with pbs, fixed in 4% formaldehyde and dried by centrifugation. slides were scanned on an innopsys innoscan 1100al to acquire the data of which lectins bound to the cells and analysed using innopsys mapix data acquisition and analysis software and microsoft excel for statistical analysis (student’s unpaired t-test of fluorescence of background spots vs fluorescence of lectin printed spots)., […]

PMCID: 5711863
PMID: 29196710
DOI: 10.1038/s41598-017-16888-z

[…] slides were put in absolute ethyl alcohol for extraction and dried after washing. the hybridization pattern was detected using a microarray scanner innoscan 900 (innopsys, france), and the software mapix 2.9.5 was used to get the fluorescence signal data. for the species with more than 2 geographic populations, at least 2 adults from each population were used for hybridization; […]

PMCID: 5667890
PMID: 29059230
DOI: 10.1371/journal.ppat.1006682

[…] the array surface in a humidified chamber for 60 min before washing and analysis using an innoscan 1100al microarray scanner (innopsys, chicago, il). fluorescent signal intensity was measured using mapix (innopsys) and mean intensity minus mean background of 4 replicate spots was calculated. a complete list of the glycans on the array is presented in ., human serum samples were obtained […]


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Mapix institution(s)
INNOPSYS, Carbonne, France

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