MAPPER database statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

MAPPER database specifications


Unique identifier OMICS_01877
Name MAPPER database
Alternative names Multi-genome Analysis of Positions and Patterns of Elements of Regulation, MAPPER2
Restrictions to use None
Maintained No


  • Invertebrates
    • Drosophila melanogaster
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Publications for Multi-genome Analysis of Positions and Patterns of Elements of Regulation

MAPPER database citations


Functional polymorphism of the renalase gene is associated with cardiac hypertrophy in female patients with aortic stenosis

PLoS One
PMCID: 5655536
PMID: 29065134
DOI: 10.1371/journal.pone.0186729

[…] E18927, GSE26328, GSE29692 and GSE55579 for DNase-seq data and GSE30263 for ChIP-seq data).For the computational identification of transcription factor which binding sites are affected by rs2296545 a MAPPER2[, ] the platform that combines TRANSFAC[] and JASPAR[] motifs with the search power of profile hidden Markov models, was used ( Statistical analysis was perfo […]


Genome Wide DNA Methylation Analysis Reveals a Potential Mechanism for the Pathogenesis and Development of Uterine Leiomyomas

PLoS One
PMCID: 3688587
PMID: 23818951
DOI: 10.1371/journal.pone.0066632

[…] Viewer (MeV in the TM4 microarray Software Suite; http://www.tm4org/mevhtml) was used for principal component analysis (PCA) . The analysis for ER alpha-target genes analysis was performed using the MAPPER database ( . Chromosome distribution analysis was performed using DAVID 6.7 ( . Integrative Genomics Viewer (http://www.broadinsti […]


Integrated Analysis of Transcriptomic and Proteomic Data

Curr Genomics
PMCID: 3637682
PMID: 24082820
DOI: 10.2174/1389202911314020003

[…] MAPPER (Multi-genome Analysis of Positions and Patterns of Elements of Regulation) is a platform for identifying transcription factors binding sites (TFBSs) in multiple genomes []. Binding sites of 4 transcri […]


Looking to check out a full list of citations?

MAPPER database institution(s)
Children's Hospital Informatics Program, Children's Hospital Boston, Harvard Medical School, Enders Research Building, Boston, MA, USA

MAPPER database reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review MAPPER database