Main logo
tutorial arrow
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Mapping and Analysis of SireVirus Elements database MASiVEdb


A collective and systematic resource of Sireviruses in plants. MASiVEdb is unlike any other transposable element database, providing a multitude of highly curated and detailed information on a specific genus across its hosts, such as complete set of coordinates, insertion age, and an analytical breakdown of the structure and gene complement of each element. All data are readily available through basic and advanced query interfaces, batch retrieval, and downloadable files. A purpose-built system is also offered for detecting and visualizing similarity between user sequences and Sireviruses, as well as for coding domain discovery and phylogenetic analysis. MASiVEdb is currently the most comprehensive directory of Sireviruses, and as such complements other efforts in cataloguing plant transposable elements and elucidating their role in host genome evolution.

User report

tutorial arrow
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

MASiVEdb forum

tutorial arrow
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

MASiVEdb classification

  • Plants

MASiVEdb specifications

Restrictions to use:

MASiVEdb support


  • Alexandros Bousios <>


tutorial arrow
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship



Institute of Agrobiotechnology, Centre for Research and Technology Hellas, Thessaloniki, Greece; Department of Genetics and Plant Breeding, Aristotle University of Thessaloniki, Thessaloniki, Greece; Central European Institute of Technology, Masaryk University, Brno, Czech Republic

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.