MAPPP pipeline

MAPPP specifications

Information


Unique identifier OMICS_05743
Name MAPPP
Alternative names MHC-I Antigenic Peptide Processing Prediction, FRAGPREDICT
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Hans Mollenkopf <>

Publication for MHC-I Antigenic Peptide Processing Prediction

MAPPP citations

 (4)
2017
PMCID: 5602290

[…] amur) causing hfrs. the epitopes that bind to class i hla supertypes that is also cleaved only at the flanking regions by human proteasomes, binding to tap efficiently was identified by the programs mappp and tappred respectively. this study enabled the prediction of mhc class i binding t- cell epitopes from hantaviruses towards development of a designer peptide vaccine., all available complete […]

2017
PMCID: 5602290

[…] for strong binding and weak binding in terms of percent rank. strong binders alone were selected and used for further analysis as shown below:, mhc-i antigenic peptide processing prediction (mappp) program [17] was used to predict proteasomal cleavage. the program generates a probability for the cleavage of each possible peptide from a protein by the proteasome in the cell […]

2017
PMCID: 5450251

[…] rank, 0.5 and 2 respectively was used in our study as in previous reports on other analytical approaches. strong binders alone were selected and used for further analysis., this was predicted using mappp (mhc-i antigenic peptide processing prediction) program [20]. the program generates a probability for the cleavage of each possible peptide from a protein by the proteasome in the cell […]

2008
PMCID: 2569417

[…] steps of the antigen processing pathway, and use a threshold on the summed score (e.g. mhc-pathway [23] and netctl [22]), and those that eliminate epitope candidates at each step (e.g. epijen [19], mappp [24] and the alternative implementation of mhc-pathway [23])., in this study we use the alternative implementation of the mhc-pathway model [23]. we screen all possible peptide fragments of 14 […]

MAPPP institution(s)
University of Ulm, Department of Theoretical Computer Science, Ulm, Germany

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