MapQTL pipeline

MapQTL specifications

Information


Unique identifier OMICS_07090
Name MapQTL
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Windows
License Commercial
Computer skills Medium
Version 6.0
Stability No
Maintained No

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MapQTL IN pipelines

 (4)
2015
PMCID: 4687042
PMID: 26689832
DOI: 10.1038/srep18661

[…] whether the correlation of two traits was statistically significant by comparison to zero with student’s t-test (p-value ≤ 0.05)., qtl mapping analysis was performed for three growth traits using mapqtl 6 software (http://www.kyazma.nl/index.php/mc.mapqtl). composite interval mapping43 and multiple qtl model (mqm) mapping44 were utilized to detect significant markers associated […]

2015
PMCID: 4687042
PMID: 26689832
DOI: 10.1038/srep18661

[…] significant by comparison to zero with student’s t-test (p-value ≤ 0.05)., qtl mapping analysis was performed for three growth traits using mapqtl 6 software (http://www.kyazma.nl/index.php/mc.mapqtl). composite interval mapping43 and multiple qtl model (mqm) mapping44 were utilized to detect significant markers associated with the traits of tw, tl and th. lod score significance thresholds […]

2013
PMCID: 3558514
PMID: 23382900
DOI: 10.1371/journal.pone.0054468

[…] actual sequenced ssr marker. mapchart 2.2 [26] was used to graphically represent synteny and collinearity between the genetic maps and the genome assembly., the multiple-qtl model (mqm) package of mapqtl 6.0 [27] with automatic cofactor selection was used to map putative and suggestive qtl intervals on the family 331 genetic map. the non-parametric kruskal-wallis (kw) analysis […]

2013
PMCID: 3672171
PMID: 23750223
DOI: 10.1371/journal.pone.0064987

[…] to determine the threshold for lod using a type i error rate of p = 0.05, p = 0.01 and p = 0.001. significant qtls and regions were graphically visualized using the software mapchart 2.1 and mapqtl 5. qtl confidence intervals were estimated by 1.8-lod support interval with 95% confidence interval probability coverage [42]., qtl analyses for total length, body length, body weight, […]

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