MAPS specifications

Information


Unique identifier OMICS_33156
Name MAPS
Alternative name mRNA Assembler for ProteogenomicS
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data Some aligned reads from unsorted SAMs or BAMs.
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Maxim Shokhirev <>

Publication for mRNA Assembler for ProteogenomicS

MAPS institution(s)
Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA; Razavi Newman Integrative Genomics and Bioinformatics Core, Salk Institute for Biological Studies, La Jolla, CA, USA
MAPS funding source(s)
Supported by the Razavi Newman Integrative Genomics and Bioinformatics Core and Next Generation Sequencing Core Facilities of the Salk Institute with funding from NIH-NCICCSG:P30 014195, the Chapman Foundation and the Helmsley Charitable Trust; by Larry Hillblom Foundation Fellowship Grant; by NIH (R01 GM102491), the NCI Cancer Center Support Grant P30 (CA014195 MASS core), The Leona M. and Harry B. Helmsley Charitable Trust grant (#2012-PG-MED002), and Dr. Frederick Paulsen Chair/Ferring Pharmaceuticals.

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