MARCOIL pipeline
MARCOIL specifications
Information
| Unique identifier | OMICS_09324 |
|---|---|
| Name | MARCOIL |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Input data | Protein sequence |
| Input format | FASTA |
| Output data | HMM based on MTIDK and other matrices |
| Operating system | Unix/Linux |
| Computer skills | Advanced |
| Stability | Stable |
| Maintained | Yes |
Versioning
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Maintainer
- person_outline Mauro Delorenzi <>
Information
| Unique identifier | OMICS_09324 |
|---|---|
| Name | MARCOIL |
| Interface | Web user interface |
| Restrictions to use | None |
| Input data | Protein sequence |
| Input format | FASTA |
| Output data | HMM based on MTIDK and other matrices |
| Computer skills | Basic |
| Stability | Stable |
| Maintained | Yes |
Maintainer
- person_outline Mauro Delorenzi <>
Publication for MARCOIL
2002 Bioinformatics
PMID: 12016059
MARCOIL IN pipeline
2010
PMCID: 2875224
PMID: 20459678
DOI: 10.1186/1745-6150-5-33
[…] the signature gtp-binding loop containing the gggtg(s/t)g motif [8,12]. the central portion of the huta_2051 protein (445-781 aa) consists of an extended coiled-coil as predicted using the marcoil program [13], followed by a mostly α-helical globular domain according to the secondary structure prediction made using the psipred program [14]., we performed an exhaustive psi-blast search […]
MARCOIL institution(s)
Genetics and Bioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia
MARCOIL reviews
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