Tool stats & trends
Looking to identify usage trends or leading experts?
|Alternative name||MicroArray Rank Query|
|Interface||Web user interface|
|Restrictions to use||None|
- person_outline Pedro Carmo-Saez
Publication for MicroArray Rank Query
A novel connection between the Cell Wall Integrity and the PKA pathways regulates cell wall stress response in yeast
[…] criptional profiles of yeast cells treated with CAS have been previously reported, . Here, comparison of the transcriptional profiles of the wild-type strain and the slt2∆ mutant, in combination with MARQ data-mining, have allowed us uncover a novel regulatory mechanism associated to PKA inhibition not previously described.In terms of the PKA-related transcriptional response caused by CAS treatmen […]
Transcriptional data: a new gateway to drug repositioning?
[…] ata repositories based on similarity with an input signature in a similar manner to cMap. ProfileChaser searches microarray repositories based on genome-wide patterns of differential expression, and MARQ mines GEO for experiments that generate a differential expression profile that is similar or anti-correlated to an input gene expression signature. Finally, DvD is a recently developed tool prov […]
Discovering biological connections between experimental conditions based on common patterns of differential gene expression
[…] compare openSESAME with two other methods that relate gene expression differences in GEO-deposited data to a query signature. One of the key differences between openSESAME and both GeneChaser  and MARQ  is that, unlike openSESAME, these methods precompute the degree of differential expression associated with phenotypic comparisons gleaned from sample annotation information that has been depos […]
Looking to check out a full list of citations?
Be the first to review MARQ