MaskerAid

On request from the authors

Genome Sequencing Center and Department of Genetics, Washington University School of Medicine, St. Louis, MO 63108, USA

• (Bedell et al., 2000) MaskerAid: a performance enhancement to RepeatMasker. Bioinformatics.
  PMID: 11159316

• (Bergman and Quesneville, 2007) Discovering and detecting transposable elements in genome sequences. Briefings in bioinformatics.
  PMID: 17932080
• (Anisimova et al., 2015) Statistical approaches to detecting and analyzing tandem repeats in genomic sequences. Frontiers in bioengineering and biotechnology.
  PMID: 25853125
• (Saha et al., 2008) Empirical comparison of ab initio repeat finding programs. Nucleic acids research.
  PMID: 18287116
• (Lerat, 2010) Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs. Heredity.
  PMID: 19935826
• (Janicki et al., 2011) Bioinformatics and genomic analysis of transposable elements in eukaryotic genomes. Chromosome research.
  PMID: 21850457