Mass spectrometry software tools

Mass spectrometry applications

Mass spectrometry software tools

Most Recent Tools

Desktop app
Prequips Prequips

Prequips

Supports interactive data exploration to efficiently interact with the data…

Supports interactive data exploration to efficiently interact with the data through graphical viewers and data filters. Prequips is an integrative software platform for comparative proteomics-based…

Desktop app
Protein Digestion… Protein Digestion Simulator

Protein Digestion Simulator

Reads a text file containing protein or peptide sequences and outputs the data…

Reads a text file containing protein or peptide sequences and outputs the data to a tab-delimited file. The Protein Digestion Simulator can optionally digest the input sequences using trypsin,…

Desktop app
MultiAlign MultiAlign

MultiAlign

Aligns multiple liquid chromatography-mass spectrometry (LC-MS) datasets to one…

Aligns multiple liquid chromatography-mass spectrometry (LC-MS) datasets to one another by clustering mass and chromatographic elution features across datasets. The MultiAlign application provides…

Desktop app
LcMsSpectator LcMsSpectator

LcMsSpectator

Presents the results from ProMex and MSPathFinder in a format that allows quick…

Presents the results from ProMex and MSPathFinder in a format that allows quick manual evaluation of critical attributes for high-confidence proteoform identifications. LcMsSpectator is a standalone…

Most Popular Tools

Desktop app
MetaProteomeAnalyzer MetaProteomeAnalyzer

MPA MetaProteomeAnalyzer

An intuitive open-source tool for metaproteomics data analysis and…

An intuitive open-source tool for metaproteomics data analysis and interpretation, which includes multiple search engines and the feature to decrease data redundancy by grouping protein hits to…

Web app
Unipept Unipept

Unipept

An open source web application that is designed for metaproteomics analysis…

An open source web application that is designed for metaproteomics analysis with a focus on interactive data-visualization. Unipept is underpinned by a fast index built from UniProtKB and the NCBI…

Desktop app
Xlink Analyzer Xlink Analyzer

Xlink Analyzer

A software tool for visualization and analysis of cross-linking mass…

A software tool for visualization and analysis of cross-linking mass spectrometry (XL-MS) data in the context of the three-dimensional structures. Xlink Analyzer enables automatic visualization of…

Desktop app
Metriculator Metriculator

Metriculator

A software tool designed to facilitate long-term storage of extensive…

A software tool designed to facilitate long-term storage of extensive performance metrics. Metriculator features a web interface that generates interactive comparison plots for contextual…

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