Mass spectrometry software tools

Mass spectrometry applications

Mass spectrometry software tools

Most Recent Tools

Decision Forest
Desktop

Decision Forest

Outperforms decision tree in both training and validation. Decision forest is…

Outperforms decision tree in both training and validation. Decision forest is an ensemble method developed by combining the predictions from multiple independent decision tree models to reach a…

Group-DIA
Desktop

Group-DIA

Analyzes multiple data-independent acquisition (DIA) data files simultaneously.…

Analyzes multiple data-independent acquisition (DIA) data files simultaneously. Group-DIA is an untargeted analysis method which combines the elution profiles of precursor ions and fragment ions from…

xTract
Desktop

xTract

Encompasses a suite of algorithms that allows the automated processing and…

Encompasses a suite of algorithms that allows the automated processing and statistical validation of quantitative data from quantitative chemical cross-linking-mass spectrometry (qCX-MS) experiments.…

Xwalk
Desktop
Web

Xwalk

Displays and computes chemical cross-linking of proteins or protein complexes.…

Displays and computes chemical cross-linking of proteins or protein complexes. Xwalk is a Java package that uses grids and a search algorithm to compute the length of the shortest path. It checks…

Most Popular Tools

MPA
Desktop

MPA MetaProteomeAnalyzer

An intuitive open-source tool for metaproteomics data analysis and…

An intuitive open-source tool for metaproteomics data analysis and interpretation, which includes multiple search engines and the feature to decrease data redundancy by grouping protein hits to…

Unipept
Web

Unipept

An open source web application that is designed for metaproteomics analysis…

An open source web application that is designed for metaproteomics analysis with a focus on interactive data-visualization. Unipept is underpinned by a fast index built from UniProtKB and the NCBI…

Xlink Analyzer
Desktop

Xlink Analyzer

A software tool for visualization and analysis of cross-linking mass…

A software tool for visualization and analysis of cross-linking mass spectrometry (XL-MS) data in the context of the three-dimensional structures. Xlink Analyzer enables automatic visualization of…

Metriculator
Desktop

Metriculator

A software tool designed to facilitate long-term storage of extensive…

A software tool designed to facilitate long-term storage of extensive performance metrics. Metriculator features a web interface that generates interactive comparison plots for contextual…

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