Mass spectrometry software tools

Mass spectrometry applications

Mass spectrometry software tools

Most Recent Tools

PGCA
Desktop

PGCA Protein Group Code Algorithm

Merges protein summaries from multiple experimental quantitative proteomics…

Merges protein summaries from multiple experimental quantitative proteomics data. PGCA connects two or more groups with overlapping accession numbers. The groups created by this tools from multiple…

MSqRob
Desktop

MSqRob

Allows a user to do quantitative protein-level statistical inference on liquid…

Allows a user to do quantitative protein-level statistical inference on liquid chromatography-mass spectrometry (LC-MS) proteomics data. MSqRob is a R package with a Shiny App that provides a…

LipidFinder
Desktop

LipidFinder

Helps to discover new lipid molecular species. LipidFinder is a computational…

Helps to discover new lipid molecular species. LipidFinder is a computational workflow which searches three independent online databases to obtain putative identification of lipids, and assigns them…

MetDIA
Desktop

MetDIA

Extracts targeted metabolites from multiplexed mass spectrometry (MS)/MS…

Extracts targeted metabolites from multiplexed mass spectrometry (MS)/MS spectra generated using data-independent acquisition (DIA) technique. MetDIA considers each metabolite in the spectral library…

Most Popular Tools

MPA
Desktop

MPA MetaProteomeAnalyzer

An intuitive open-source tool for metaproteomics data analysis and…

An intuitive open-source tool for metaproteomics data analysis and interpretation, which includes multiple search engines and the feature to decrease data redundancy by grouping protein hits to…

Unipept
Web

Unipept

An open source web application that is designed for metaproteomics analysis…

An open source web application that is designed for metaproteomics analysis with a focus on interactive data-visualization. Unipept is underpinned by a fast index built from UniProtKB and the NCBI…

Xlink Analyzer
Desktop

Xlink Analyzer

A software tool for visualization and analysis of cross-linking mass…

A software tool for visualization and analysis of cross-linking mass spectrometry (XL-MS) data in the context of the three-dimensional structures. Xlink Analyzer enables automatic visualization of…

Metriculator
Desktop

Metriculator

A software tool designed to facilitate long-term storage of extensive…

A software tool designed to facilitate long-term storage of extensive performance metrics. Metriculator features a web interface that generates interactive comparison plots for contextual…

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