MatchedFilter specifications

Information


Unique identifier OMICS_31121
Name MatchedFilter
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
First release date 2018
Stability Stable
Requirements
Numpy, scipy, scikit-learn, matplotlib, seaborn, metaseq, pybedtools
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Anurag Sethi

Publication for MatchedFilter

MatchedFilter institution(s)
Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; School of Medicine, The Chinese University of Hong Kong, China; Department of Computer Science, The Chinese University of Hong Kong, China; Department of Computer Science, Yale University, New Haven, CT, USA; Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT, USA; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
MatchedFilter funding source(s)
Supported by the NIH grant HG009446-01, by NHLBI grant R24HL123879, and NHGRI grants R01HG003988, and U54HG006997, and UM1HG009421 and a Department of Energy Contract DE-AC02-05CH11231, University of California.

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