Matchprot specifications


Unique identifier OMICS_03666
Name Matchprot
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C, C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


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Publication for Matchprot

Matchprot in publication

PMCID: 1764482
PMID: 17254310
DOI: 10.1186/1471-2105-7-S5-S5

[…] the aim in this paper, is to derive an alternate formulation of the protein structure comparison problem, resulting in development of a fast algorithm for comparing protein structures, called matchprot. moreover, this algorithm is capable of detecting non-topological similarities. our formulation is motivated from the distance matrix overlap formulation []. a novel characterization […]

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Matchprot institution(s)
Department of Computer Science and Automation, Indian Institute of Science, Bangalore, India; Bioinformatics Center, Indian Institute of Science, Bangalore, India
Matchprot funding source(s)
This tool is supported by Ministry of Human Resource Development, Government of India (grant number F26-11/ 2004).

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