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MatCont specifications

Information


Unique identifier OMICS_21418
Name MatCont
Alternative name Numerical Bifurcation Analysis Toolbox in Matlab
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
License Public Domain
Computer skills Advanced
Version 6.6
Stability Stable
Maintained Yes

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  • person_outline Willy Govaerts <>

Publication for Numerical Bifurcation Analysis Toolbox in Matlab

MatCont in publications

 (65)
PMCID: 5870965
PMID: 29584728
DOI: 10.1371/journal.pone.0192842

[…] to find the solutions by changing the value of ys ∈ (−3.5, 12) in and then calculating the value of the corresponding input u. the asymmetric equilibria are computed using the feature of the cl-matcont package [], that exploits the continuity of solutions with respect to the variation of u., two separate bifurcation analyses were conducted corresponding to the symmetric and asymmetric […]

PMCID: 5852126
PMID: 29568262
DOI: 10.3389/fncel.2018.00062

[…] orbit bifurcation (snho), which is a switch point between the hom and snic bifurcations, are also considered in the present paper., bifurcation diagrams are obtained using the dynamical software matcont (dhooge et al., ) and xppaut (ermentrout, )., when iapp = −0.05 μa/cm2, the theoretical neuron model exhibits resting state when gh = 0.05ms/cm2, 0.04 ms/cm2 (in the presence of ih), and 0.0 […]

PMCID: 5747161
PMID: 29284486
DOI: 10.1186/s12918-017-0489-y

[…] from the modelling fits the micro-array data very well. therefore, a smaller value of it indicates a better fit., all computational work has been done using matlab [] and matlab toolboxes: (i) matcont [] and (ii) curve fitting tool box., additional file 1: figure s1. additional file 2: , electronic supplementary material , the online version of this article (10.1186/s12918-017-0489-y) […]

PMCID: 5763301
PMID: 29322934
DOI: 10.1186/s12918-017-0508-z

[…] as a series of intermediate models with 10%, 20%, … 90% of the klf2 effect, causing intermediate levels of decrease in the pai1 and tsp1 synthesis rates., bifurcation analysis was performed using matcont (https://sourceforge.net/projects/matcont/). equilibrium continuation function was called to generate the bifurcation curves in fig. and fig. ., isolation of primary hepatocytes […]

PMCID: 5711038
PMID: 29149173
DOI: 10.1371/journal.pcbi.1005869

[…] antibodies directed against myc (cell signaling 2276, 1:1000), ha (abcam 16918, 1:1000), cul1p (1:500) [] and cdc2 (santa cruz, sc-53p (pstaire) 1:500)., the simulations depicted in were done using matcont []. the transient simulations involving substrate degradation depicted in figs and – were done using the simbiology toolbox of matlab []. derivations of the analytical formulas in eqs – […]


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MatCont institution(s)
Department Informatietechnologie, Katholieke Hogeschool SintLieven, Gent, Belgium; Department of Applied Mathematics and Computer Science, Ghent University, Gent, Belgium; Department of Mathematics, Utrecht University, Utrecht, Netherlands; Department of Electrical Engineering, Mathematics and Computer Science, Twente Universtity, Enschede, Netherlands

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