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Number of citations per year for the bioinformatics software tool MatrixConverter
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MatrixConverter specifications

Information


Unique identifier OMICS_13492
Name MatrixConverter
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A table of phenomic characters.
Input format CSV, TXT
Output data Some discrete character matrices for phylogenetic.
Output format NEXUS, PHYLIP, NeXML, TXT
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Gordon Burleigh

Publication for MatrixConverter

MatrixConverter citation

library_books

Extraction of phenotypic traits from taxonomic descriptions for the tree of life using natural language processing

2018
Appl Plant Sci
PMCID: 5895189
PMID: 29732265
DOI: 10.1002/aps3.1035

[…] The NLP pipeline used to parse and extract phenotypic characters from taxonomic descriptions includes the Explorer of Taxon Concepts (ETC; Cui et al., ) and MatrixConverter (Liu et al., ). ETC (Figs. A, ) is an online application (http://etc.cs.umb.edu/etcsite/) that contains the Text Capture and Matrix Generation tools, which are used to parse text and a […]


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MatrixConverter institution(s)
Department of Biology, University of Florida, Gainesville, FL, USA; State Key Laboratory of Software Engineering, Computer School, Wuhan University, Wuhan, Hubei, China

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