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Mauve

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Alternative name: progressiveMauve

A system for constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignments provide a basis for research into comparative genomics and the study of genome-wide evolutionary dynamics. Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the lengths of sequences being aligned.

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Mauve versioning

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Mauve classification

Mauve specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java
Computer skills:
Medium
Maintained:
Yes
Debian:
https://packages.qa.debian.org/p/progressivemauve.html
Interface:
Command line interface, Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Stability:
Stable
Galaxy:
https://toolshed.g2.bx.psu.edu/repository?repository_id=451226d76cd8e62d

Mauve support

Maintainer

  • Aaron E. Darling <>

Credits

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Publications

Institution(s)

Genome Center and Department of Computer Science, University of Wisconsin, Madison, WI, USA

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