mBISON specifications


Unique identifier OMICS_14646
Alternative name miRNA binding site over-representation
Interface Web user interface
Restrictions to use None
Input data Gene list, ChIP-seq datasets
Input format BED
Output data FDR (of over-representation in the 3′UTRs of the respective genes) for each of 153 miRNA-families
Output format TXT
Computer skills Basic
Stability No
Maintained No


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Publication for miRNA binding site over-representation

mBISON citation


Alteration of mRNA and microRNA expression profiles in rat muscular type vasculature in early postnatal development

Sci Rep
PMCID: 4466593
PMID: 26073182
DOI: 10.1038/srep11106

[…] We herein performed a large-scale investigation encompassing mRNA and miRNA microarrays profiling, meta-analysis for miRNA-target interaction predictions, pathways, gene ontologies and miRNA binding site over-representation analysis to shed light on the alteration of genes and miRNAs expression in muscular type vasculature in early postnatal development, to explore the signaling cas […]

mBISON institution(s)
Max Delbrück Center for Molecular Medicine, Berlin, Germany; Institute of Molecular Biology, Mainz, Germany; Faculty of Biology, Johannes-Gutenberg University of Mainz, Mainz, Germany; Department of Medical Epidemiology and Biostatistics, Karolinska Institute, Stockholm, Sweden
mBISON funding source(s)
This work was supported by a grant from the Deutsche Forschungsgemeinschaft [Priority Program 1463].

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