MKT specifications

Information


Unique identifier OMICS_15192
Name McDonald Kreitman Test
Interface Web user interface
Restrictions to use None
Input data Protein sequence file.
Input format FASTA
Output data A summary table with all the performed comparisons for each comparison, basic information is provided on the main parameters chosen and the input sequences for each region, detailed results for each performed comparison.
Output format HTML
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Raquel Egea <>

MKT article

MKT citation

2005
PMCID: 1183528

[…] d. melanogaster and 11 strains of d. simulans. the fu and li [40], tajima's d [41], and hudson-kreitman-aguade [42] tests were carried out on the complete sequence, including the intron, whereas the mcdonald-kreitman test [39] was carried out on coding regions only (1,209 total positions with indels removed). fixed replacement changes in the chromo and chromo shadow domains were polarized using […]

MKT institution(s)
Genomics, Bioinformatics and Evolution Group, Departament de Gen├Ętica i Microbiologia, Universitat Autonoma de Barcelona, Bellaterra (Barcelona), Spain
MKT funding source(s)
This work was supported by the Ministerio de Educacio┬┤n y Ciencia, Spain (Grant BFU-2006-08640).

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