MCPath statistics

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Citations per year

Number of citations per year for the bioinformatics software tool MCPath
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Tool usage distribution map

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Associated diseases

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MCPath specifications

Information


Unique identifier OMICS_07968
Name MCPath
Interface Web user interface
Restrictions to use None
Input data A PDB ID or an uploaded structure
Output data The output lists all pathways ranked with their probabilities and populated pathways.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Turkan Haliloglu

Publication for MCPath

MCPath citation

library_books

Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics

2016
PLoS Comput Biol
PMCID: 4849799
PMID: 27124275
DOI: 10.1371/journal.pcbi.1004619

[…] d with normal mode analysis (NMA) [–], correlation matrices [–], community-network analysis [], mutual information [], and dynamical network analysis [–]. MC-based methods have also been applied. The MCPath method introduced in [] models a receptor as a weighted network of interacting residues and builds an MC trajectory by repeatedly applying MC moves that directly propagate a signal between two […]


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MCPath institution(s)
Department of Chemical Engineering and Polymer Research Center, Bogazici University, Bebek, Istanbul, Turkey
MCPath funding source(s)
TUBITAK Project 110T088 and Betil Fund.

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