- Unique identifier:
- Command line interface
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- GNU General Public License version 3.0
- Software type:
- Application/Script, Toolkit/Suite
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- Ozlem Tastan Bishop <>
BC and L were calculated successfully through "calc_network.py". In next run of "calc_delta_L.py", i am having the following error. Any suggestion;
(venv) [email protected]:~/MD-TASK$ /home/ash/MD-TASK/calc_delta_L.py --normalize --generate-plots --reference exm_0_avg_L.dat --alternatives exm_*_avg_L.dat
Started at: 2018-02-03 16:22:05.224021
Calculating delta L/L for 100 networks...
Traceback (most recent call last):
File "/home/ash/MD-TASK/calc_delta_L.py", line 114, in
File "/home/ash/MD-TASK/calc_delta_L.py", line 69, in main
calc_delta_L(args.reference, args.alternatives, args.normalize, normalization_function, args.generate_plots)
File "/home/ash/MD-TASK/calc_delta_L.py", line 48, in calc_delta_L
difference = normalization_function(difference, reference)
TypeError: 'str' object is not callable
(Brown et al., 2017)
MD-TASK: a software suite for analyzing molecular dynamics trajectories.
Research Unit in Bioinformatics (RUBi), Department of Biochemistry and Microbiology, Rhodes University, Grahamstown, South Africa; Faculty of Engineering and Natural Sciences, Sabanci University, Tuzla, Turkey
Supported by the National Institutes of Health Common Fund under grant number U41HG006941 and by the National Research Foundation (NRF), South Africa, (grant number 93690).
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