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MDCinfer specifications


Unique identifier OMICS_24039
Name MDCinfer
Alternative name Multi-Domain Cooperation infer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes




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  • person_outline Luonan Chen
  • person_outline Yong Wang
  • person_outline Ling-Yun Wu
  • person_outline Xiang-Sun Zhang
  • person_outline Rui-Sheng Wang

Publication for Multi-Domain Cooperation infer

MDCinfer citation


Pathway mapping and development of disease specific biomarkers: protein based network biomarkers

J Cell Mol Med
PMCID: 4407592
PMID: 25560835
DOI: 10.1111/jcmm.12447

[…] s ,. Computational programs were developed to integrate selected genes or proteins into the knowledge-based networks via the combination of genomics, proteomics and bioinformatics, such as GRNInfer , MDCinfer , TRNInfer , Samo , MNAligner , PTG , PRNA , NOA , differential dependency network (DDN) , WGCNA , SurvNet or DiME , each of them has its own advantages and strength on basis of scientific n […]

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MDCinfer institution(s)
School of Information, Renmin University of China, Beijing, China; Department of Electronics Information and Communication Engineering, Osaka Sangyo University, Osaka, Japan; Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China; Institute of Systems Biology, Shanghai University, Shanghai, China; ERATO Aihara Complexity Modelling Project, JST, Tokyo, Japan; Institute of Industrial Science, The University of Tokyo, Tokyo, Japan
MDCinfer funding source(s)
Supported by JSPS under JSPS-NSFC collaboration project, the National Nature Science Foundation of China (NSFC) under grant No.10701080 and the Ministry of Science and Technology, China, under grant No.2006CB503905.

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