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MedEvi specifications


Unique identifier OMICS_05247
Name MedEvi
Interface Web user interface
Restrictions to use None
Output data MedEvi outputs the result of a query in the form of an aligned hypertext.
Computer skills Basic
Stability Stable
Maintained No


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MedEvi citations


Improving the extraction of complex regulatory events from scientific text by using ontology based inference

J Biomed Semantics
PMCID: 3239303
PMID: 22166672
DOI: 10.1186/2041-1480-2-S5-S3

[…] in table ., the adaptation included only the following work: we manually collected keywords of the concepts ‘growth’ and ‘death’ from wordnet and constructed 40 patterns for the keywords by using medevi []. as candidate agents, we collected human gene/protein names from uniprot. we also collected cell type names from mesh. these are newly built resources that were not required for the first […]


Development of a classification scheme for disease related enzyme information

BMC Bioinformatics
PMCID: 3166944
PMID: 21827651
DOI: 10.1186/1471-2105-12-329

[…] their physical interactions and regulatory relationships like ihop [] where information on enzymes and diseases can be found but is not in the very focus. medevi [] is available through web-access as well and presents references and the particular evidence-sentence containing biomedical entities and semantic […]


Establishing a distributed system for the simple representation and integration of diverse scientific assertions

J Biomed Semantics
PMCID: 2903724
PMID: 20626925
DOI: 10.1186/2041-1480-1-S1-S5

[…] further interlink both efforts., the atags extracted from pubmed conclusion sections can be compared to a variety of sentence-based, whole-abstract search systems include i-hop [], wikigenes [] and medevi []. while these systems provide far better coverage, the search results contain a lot of unwanted noise produced by statements derived from introduction, methods and results sections […]


Facilitating the development of controlled vocabularies for metabolomics technologies with text mining

BMC Bioinformatics
PMCID: 2367623
PMID: 18460187
DOI: 10.1186/1471-2105-9-S5-S5

[…] in mind the importance of contextual information in determining the correct meaning of a term and hence its position in a cv, we deployed a practical solution: all new terms reported are linked to medevi [], a service providing local context (extracted from medline) for query terms []. clicking on a term launches a query to medevi, which in turn returns the aligned concordance (words used […]

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MedEvi institution(s)
EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

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