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Modeling Experimental Data with MeDIP Enrichment MEDME

Allows the prediction of absolute and relative methylation levels based on measures obtained by MeDIP-microarray experiments. MEDME is an experimental and analytical methodology designed to obtain enhanced estimates that better describe the true values of DNA methylation level throughout the genome.

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MEDME forum

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MEDME classification

MEDME specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Version:
1.20.0
Requirements:
grDevices, graphics, methods, stats, utils

MEDME distribution

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No versioning.

MEDME support

Documentation

Maintainer

  • Mattia Pelizzola <>

Credits

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Publications

Institution(s)

Department of Epidemiology and Public Health, Yale University School of Medicine, New Haven, CT, USA; Department of Genetics, Yale University School of Medicine, New Haven, CT, USA; Department of Pathology, Yale University School of Medicine, New Haven, CT, USA; Department of Dermatology, Yale University School of Medicine, New Haven, CT, USA

Funding source(s)

The Yale Spore in Skin Cancer funded by the National Cancer Institute grant number 1 P50 CA121974; the National Library of Medicine grant K22LM009255; the National Cancer Institute grant K22CA123146-2

Link to literature

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