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MedPost specifications

Information


Unique identifier OMICS_19801
Name MedPost
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline L. Smith <>

Publication for MedPost

MedPost in publications

 (34)
PMCID: 5497973
PMID: 28678823
DOI: 10.1371/journal.pone.0179926

[…] in microalbuminuria, deserves further investigation., (b) c0078056:vascular cell adhesion molecule-1, -disrupts-, c0730345:microalbuminuria, semrep relies on the umls specialist lexicon [], medpost part-of-speech tagger [], and noun phrase chunking, and it is supported by metamap [] for normalizing noun phrases to umls metathesaurus concepts. entrez gene [] serves as a supplementary […]

PMCID: 5431905
PMID: 28377584
DOI: 10.1038/s41467-017-00020-w

[…] revealed that the lox5-parapeptide, a key signature in lophotrochozoan and platyhelminthean hox6/lox5 genes, is absent and replaced by different signatures in rotifera and chaetognatha, and that the medpost gene, until now unique to chaetognatha, is also present in rotifers. collectively, our results support an inclusion of chaetognaths in gnathiferans and gnathifera as sister group […]

PMCID: 4832532
PMID: 27080229
DOI: 10.1186/s12859-016-1009-6

[…] nearly 5 decades., amantadine-isa-antiviral agents, amantadine-treats-parkinson disease, amantadine-treats-levodopa-induced dyskinesias, semrep processing relies on the umls specialist lexicon [], medpost part-of-speech tagger [], and underspecified syntactic analysis, and it is supported by metamap [] for normalizing noun phrases to umls metathesaurus concepts. entrez gene [] serves […]

PMCID: 4642409
PMID: 26323337
DOI: 10.2196/jmir.4612

[…] sentence, or paragraph. pos taggers are commonly used in nlp and have many different applications, such as phrase parsers. in our analysis, we discovered that metamap uses a pos tagger called medpost skr (semantic knowledge representation) [] to split text into phrases. however, it did not use the resulting pos information when mapping to the umls. such pos failures could […]

PMCID: 4563061
PMID: 26380302
DOI: 10.1155/2015/873012

[…] preprocessing was applied. first, the raw text was extracted from the clinical data while retaining the original line breaks. the text distinguished by the line breaks was then processed by the medpost tagger [] to further split it into lines of texts that consist of tokens. each line was then aligned with the annotations of domain experts to generate training instances for the machine […]


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MedPost institution(s)
Computational Biology Branch, National Center for Biotechnology Information, Bethesda, MD, USA; Cognitive Science Branch, Lister Hill National Center for Biomedical Communications, Bethesda, MD, USA

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