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Membrane protein-protein docking software tools | Structure data analysis

A wide range of fundamental biological processes are mediated by membrane proteins. Despite their large number and importance, less than 1% of all 3D protein structures deposited in the Protein Data Bank are of membrane proteins. This is mainly due…
Memdock
Web

Memdock

Attempts to customize three docking steps to the lipid bilayer environment.…

Attempts to customize three docking steps to the lipid bilayer environment. Memdock is an integrated docking algorithm for a-helical membrane proteins which includes the docking, refinement and…

DOCK/PIERR
Web

DOCK/PIERR

Predicts structures of transmembrane protein complexes. DOCK/PIERR is a docking…

Predicts structures of transmembrane protein complexes. DOCK/PIERR is a docking algorithm that predicts, in atomic resolution, the structure of the complex formed by two proteins, given their…

MPDock
Desktop

MPDock

Draws on the rich existing functionality of Rosetta3. MPDock is a…

Draws on the rich existing functionality of Rosetta3. MPDock is a proof-of-concept application that was adapted for membrane proteins. The protocol consists of two steps: (1) a prepacking step to…

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