MEMSAT-SVM pipeline

MEMSAT-SVM specifications


Unique identifier OMICS_07204
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Timothy Nugent <>

Publications for MEMSAT-SVM

MEMSAT-SVM IN pipelines

PMCID: 5648256
PMID: 29049367
DOI: 10.1371/journal.pone.0186865

[…] expasy proteomic server ( was used to translate the nkaα sequence of t. squamosa into an amino acid sequence. transmembrane domains were defined using memsat3 and memsat-svm provided by the psipred server ( netphos 2.0 was employed to predict potential phosphorylation sites. in order to confirm the identity of nkaα, […]

PMCID: 4526809
PMID: 26300872
DOI: 10.3389/fmicb.2015.00808

[…] was done using was done using arnold web tool (naville et al., 2011; b. cereus spoiisa membrane topology prediction was done using the memsat3 and memsat-svm algorithms (; nugent and jones, 2009)., the spoiis toxin-antitoxin system in bacillus subtilis consists of a spoiisa toxin that is neutralized […]

MEMSAT-SVM institution(s)
Bioinformatics Group, Department of Computer Science, University College London, Gower Street, London, UK

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