MemType-2L specifications

Information


Unique identifier OMICS_14977
Name MemType-2L
Interface Web user interface
Restrictions to use None
Input data The protein sequence.
Output data The predicted type of protein.
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Hong-Bin Shen <>

Publication for MemType-2L

MemType-2L in publications

 (3)
PMCID: 4761391
PMID: 26966690
DOI: 10.1155/2016/8370132

[…] (pssm) based on the protein aa sequences which proved to be a better approach than functional domain feature extractions. chou and shen in [] implemented a web server (memtype-2l) which was used as a two-layer predictive engine. the first phase was used to identify the protein sequence as a membrane protein or nonmembrane protein and second phase differentiated […]

PMCID: 4276698
PMID: 25574395
DOI: 10.1155/2014/845479

[…] [] is the svm based web server to predict the g-protein coupled receptors and their subfamilies by using amino acid and dipeptide composition of protein sequences. memtype-2l (http://www.csbio.sjtu.edu.cn/bioinf/memtype/) [] is the ensemble classifier based web server to predict the membrane proteins by using pseudoamino acid composition., this section presents […]

PMCID: 2358896
PMID: 18416838
DOI: 10.1186/1471-2105-9-201

[…] multiple sequence alignment in the form of pssm has been used for predicting secretory proteins. recently number of study used pssm profile composition for developing prediction methods; for example memtype-2l, ezypred, tbpred, dnabinder, srtpred used for predicting membrane, enzyme class, subcellular localization of m. tuberculosis, dna binding and secretory proteins respectively [-]. the pssm […]


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MemType-2L institution(s)
Gordon Life Science Institute, San Diego, CA, USA; Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, Shanghai, China

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