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MeRy-B specifications

Information


Unique identifier OMICS_04812
Name MeRy-B
Restrictions to use None
Maintained Yes

Publication for MeRy-B

MeRy-B citations

 (5)
library_books

When Transcriptomics and Metabolomics Work Hand in Hand: A Case Study Characterizing Plant CDF Transcription Factors

2018
PMCID: 5876533
PMID: 29495643
DOI: 10.3390/ht7010007

[…] Since the formation of the Metabolomics Standards Initiative (MSI) in 2005, a number of metabolomics data repositories, such as MetaboLights, Metabolomics Workbench, Metabolomics Repository Bordeaux (MeRy-B), or the Metabolic Phenotype Database (MetaPhen) have been developed [,,,,]. Those databases represent a rich resource of data, in particular for metadata studies. In addition to those data rep […]

library_books

The Chemistry of Plant–Microbe Interactions in the Rhizosphere and the Potential for Metabolomics to Reveal Signaling Related to Defense Priming and Induced Systemic Resistance

2018
Front Plant Sci
PMCID: 5811519
PMID: 29479360
DOI: 10.3389/fpls.2018.00112

[…] y the number of identified metabolites (; , ). Recently, a number of databases incorporating MS or nuclear magnetic resonance (NMR)-based metabolomics and statistical tools have been developed, i.e., MeRy-B, MeltDB, and SetupX (; ). Also, a number of integrated databases (e.g., plantmetabolomics.org) are also emerging (). These include full annotation of metabolites, metabolic profiling and statis […]

library_books

A lost opportunity for science: journals promote data sharing in metabolomics but do not enforce it

2017
Metabolomics
PMCID: 5808091
PMID: 29479297
DOI: 10.1007/s11306-017-1309-5

[…] n OmicsDI (Perez-Riverol et al. ). These studies with data publicly available in dedicated repositories [MetaboLights (Haug et al. ), Metabolomics Workbench (Sud et al. ), MetaPhen (Carroll et al. ), MeRy-B (Ferry-Dumazet et al. ) and GNPS (Wang et al. )], directly link to 368 unique journal articles (as of 15th September 2017). 45.4% of these 368 journal articles are published in ten journals (Fi […]

library_books

Metabolomics in melon: A new opportunity for aroma analysis

2014
Phytochemistry
PMCID: 4180013
PMID: 24417788
DOI: 10.1016/j.phytochem.2013.12.010

[…] sing workflow within the MetAlign software package, were as described previously by and . The netCDF files have been deposited, with associated metadata, into the Metabolomics Repository of Bordeaux MeRy-B (http://services.cbib.u-bordeaux2.fr/MERYB/public/PublicREF.php?REF=M08004). […]

library_books

Advances in Omics and Bioinformatics Tools for Systems Analyses of Plant Functions

2011
PMCID: 3233218
PMID: 22156726
DOI: 10.1093/pcp/pcr153

[…] ious plant species in recent years (, , ).A number of information resources have become available in recent years to provide tools for metabolome analysis, such as PRIMe (http://prime.psc.riken.jp/), MeRy-B (http://www.cbib.u-bordeaux2.fr/MERYB/) and MetabolomeExpress (https://www.metabolome-express.org/) (, , ). The review by ) provides a well summarized list of web resources for plant metabolomi […]

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MeRy-B institution(s)
Université de Bordeaux, Centre de Bioinformatique de Bordeaux, Génomique Fonctionnelle Bordeaux, Bordeaux, France

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