Meryl statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Meryl
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Tool usage distribution map

This map represents all the scientific publications referring to Meryl per scientific context
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Associated diseases

This word cloud represents Meryl usage per disease context
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Popular tool citations

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Protocols

Meryl specifications

Information


Unique identifier OMICS_29043
Name Meryl
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C, C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Versioning


No version available

Additional information


http://kmer.sourceforge.net/wiki/index.php/Getting_Started_with_Meryl

Meryl citation

call_split

Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance

2018
MBio
PMCID: 5801463
PMID: 29437920
DOI: 10.1128/mBio.02011-17
call_split See protocol

[…] un assemblies was determined by using a k-mer inclusion approach. Briefly, 16-bp k-mers were generated from the fully resolved PacBio plasmid sequences along with the MiSeq genome assemblies by using meryl (13 May 2015 release, http://kmer.sourceforge.net/). A plasmid was considered present within a genome assembly if ≥95% of the plasmid k-mers were contained within the MiSeq genome assembly k-mer […]


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Meryl reviews

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