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Meta-All specifications

Information


Unique identifier OMICS_21668
Name Meta-All
Restrictions to use Academic or non-commercial use
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 1.2
Content license Creative commons 2.0
Maintained Yes

Maintainers


  • person_outline Dirk Koschützki
  • person_outline Stephan Weise
  • person_outline Ivo Gross
  • person_outline Christian Klukas

Additional information


This database requires the installation of Oracle Database 10g Express Edition: http://www.oracle.com/technetwork/database/express-edition/overview/index.html

Publication for Meta-All

Meta-All citations

 (4)
library_books

CNV association meta analysis in 191,161 European adults reveals new loci associated with anthropometric traits

2017
Nat Commun
PMCID: 5622064
PMID: 28963451
DOI: 10.1038/s41467-017-00556-x

[…] CNV dosage in cohort c, and N c is the sample size of cohort c. An overall Z score can be estimated as: Z Meta = β Meta/seMeta. Eventually P values are computed for each probe as: P value = 2 ∗ ϕ(−|Z Meta|). All reported results in the paper are based on the full study population, unless stated otherwise (e.g., conditional analysis).In order to decrease the number of tests and to avoid spurious as […]

library_books

Benchmarking viromics: an in silico evaluation of metagenome enabled estimates of viral community composition and diversity

2017
PeerJ
PMCID: 5610896
PMID: 28948103
DOI: 10.7717/peerj.3817

[…] taSPAdes assemblies () were computed from the software version 3.10.0, with the option “metagenomic” (all other options default). MEGAHIT assemblies () were computed from version v1.0.6 with presets “meta” (all other options default). MetaVelvet assemblies () were computed with software version 1.2.07 with the “discard_chimera” option selected, default parameters otherwise. Omega assemblies () wer […]

library_books

Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum

2016
Nat Commun
PMCID: 4740877
PMID: 26830004
DOI: 10.1038/ncomms10561

[…] ted neurons from 81 independent individuals (study 6 in ). We combined a total of 8 eQTL results (including those from the first step) into a single estimate by the fixed-effect model, referred to as Meta ALL in . Third, additional eQTL results came from 1,231 brain tissues archived in the UK brain expression database. The eQTL was evaluated for up to 10 brain regions, including cerebellum, fronta […]

call_split

Markedly Decreased Blood Perfusion of Pancreatic Islets Transplanted Intraportally Into the Liver

2012
PMCID: 3282819
PMID: 22315321
DOI: 10.2337/db10-0895
call_split See protocol

[…] The control pancreas and islet graft sections were scanned with a Laser Scanning Microscope ZEISS LSM510-Meta. All shown fluorescence images have been subjected to a median filter and changes in brightness and contrast for optimal visualization.The scanned images were analyzed with IMARIS 7.0.0 (Bitplane […]

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Meta-All institution(s)
Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, German; Brookhaven National Laboratory, Upton, NY, USA

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