Metab2MeSH statistics

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Metab2MeSH specifications


Unique identifier OMICS_03547
Name Metab2MeSH
Restrictions to use None
Maintained No


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Publication for Metab2MeSH

Metab2MeSH citations


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] ke Metmask [] for managing different identifiers, Chemical Translation Service (CTS) [] for translation of chemical identifiers, PhenoMeter [] for querying databases based on metabolic phenotype, and Metab2MeSH [] for a more efficient literature search that automatically annotates compounds with the concepts defined in MeSH, providing a fast link between the compound and the literature.Different v […]


Metabolomics and Diabetes: Analytical and Computational Approaches

PMCID: 4338589
PMID: 25713200
DOI: 10.2337/db14-0509

[…] ngs (MeSH) to link them to publications ( (). shows the annotations generated by the Cytoscape plugin MetDisease ( that uses the Metab2MeSH data set for the BCAA degradation network ().In summary, the development of methods and tools for analysis and visualization of metabolomics data remains an active area of research. […]


MeSH ORA framework: R/Bioconductor packages to support MeSH over representation analysis

BMC Bioinformatics
PMCID: 4343279
PMID: 25887539
DOI: 10.1186/s12859-015-0453-z

[…] s and is expected to become an exhaustive annotation resource for ORA. In fact, some tools for MeSH ORA are already available, such as Biocompass [], Gendoo [], Gene2mesh, Metab2mesh [] and Genemesh []. However, in certain cases, the implementation of these tools is still not sufficient, for the reasons described below. 1) Few CUI environments With the exception of the […]


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Metab2MeSH institution(s)
National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI, USA

Metab2MeSH review

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Maxime Chazalviel's avatar image No country

Maxime Chazalviel

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