- Unique identifier:
- Command line interface
- Input data:
- MetaBAT takes an assembly file (fasta format, required) and sorted bam files (one per sample, optional) as inputs.
- Operating system:
- Computer skills:
- Boost, Python, scons, g++, zlib
- Software type:
- Restrictions to use:
- Output data:
- Each discovered bin will be saved as a fasta format.
- Programming languages:
- Zhong Wang <>
No open topic.
(Kang et al., 2015)
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities.
PMID: 26336640 DOI: 10.7717/peerj.1165
Department of Energy Joint Genome Institute, Walnut Creek, CA, USA; Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; School of Natural Sciences, University of California at Merced, Merced, CA, USA
The work was supported by the Office of Science of the US Department of Energy under Contract No. DE-AC02-05CH11231.