Metabolite Detector statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

Protocols

Metabolite Detector specifications

Information


Unique identifier OMICS_02659
Name Metabolite Detector
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Medium
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Karsten Hiller

Publication for Metabolite Detector

Metabolite Detector citations

 (19)
call_split

Blocking hexose entry into glycolysis activates alternative metabolic conversion of these sugars and upregulates pentose metabolism in Aspergillus nidulans

2018
BMC Genomics
PMCID: 5863803
PMID: 29566661
DOI: 10.1186/s12864-018-4609-x
call_split See protocol

[…] The analysis of the polar metabolites was done by processing the GC-MS raw data files using Metabolite Detector as stated previously []. Briefly, the retention indices (RI) calibration was carried out based on the analyses of a mixture of FAMEs internal standards (C8-C28). The data from all […]

library_books

The Use of Metabolomics and Inflammatory Mediator Profiling Provides a Novel Approach to Identifying Pediatric Appendicitis in the Emergency Department

2018
Sci Rep
PMCID: 5840182
PMID: 29511263
DOI: 10.1038/s41598-018-22338-1

[…] led with a Waters Mass Spectrometer (Waters Corp., Milford, MA, USA) was used to perform GC-MS. An MS range of 50–800 m/z was used for scanning and the generated mass spectra were processed using the Metabolite Detector 2.06 software (Technische Universitat Carolo-Wilhelmina zu Braunschweig, Braunschweig, Germany). Metabolites were identified based on the GOLM metabolome database–. Named metabolit […]

call_split

Analytical challenges of untargeted GC MS based metabolomics and the critical issues in selecting the data processing strategy

2017
F1000Res
PMCID: 5553085
PMID: 28868138
DOI: 10.5256/f1000research.12777.r23714
call_split See protocol

[…] erature was computer controlled and was ramped from 45°C to 215°C in over 65 mins. Data pre-processing was performed in the Agilent MassHunter suit (version 8 of Qualitative Workflows and Profinder), Metabolite Detector (version 2.5), and AMDIS (Automated Mass Spectral Deconvolution and Identification System) (version 2.72), and the accuracy of data extraction of these software tools was compared […]

library_books

Metabolic and fitness determinants for in vitro growth and intestinal colonization of the bacterial pathogen Campylobacter jejuni

2017
PLoS Biol
PMCID: 5438104
PMID: 28542173
DOI: 10.1371/journal.pbio.2001390

[…] before [], with the following exceptions: helium flow was set to 1.1 ml/min, and the temperature was increased to a final 325°C. The solvent delay time was 5.80 min. Data analysis was performed with Metabolite Detector (version 2.07; []), and quantification was done using 1 unique fragment ion for each metabolite. For statistical analysis, data were first normalized by dividing the peak area of e […]

library_books

Plasma metabolomics for the diagnosis and prognosis of H1N1 influenza pneumonia

2017
PMCID: 5397800
PMID: 28424077
DOI: 10.1186/s13054-017-1672-7

[…] ometer (Waters Corp., Milford, MA, USA), using a gas chromatography time-of-flight mass spectrometry technique. The mass spectrometer was programmed in the range of 50–800 mass-to-charge ratio. Using Metabolite Detector software (version 2.06; Institut für Biochemie & Biotechnologie, Technische Universität Carolo-Wilhelmina zu Braunschweig, Braunschweig, Germany), mass spectra were processed and a […]

library_books

Metabolomic Biomarker Identification in Presence of Outliers and Missing Values

2017
Biomed Res Int
PMCID: 5331169
PMID: 28293630
DOI: 10.1155/2017/2437608

[…] ve predicted value, negative predicted value, and balanced accuracy.A better method would produce smaller values for FPR and MER and larger values for TPR and area under the ROC curve (AUC) by any DE metabolite detector. […]

Citations

Looking to check out a full list of citations?

Metabolite Detector institution(s)
Department of Bioinformatics and Biochemistry, Technische Universität Braunschweig, Braunschweig, Germany

Metabolite Detector reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Metabolite Detector