Main logo
?
tutorial arrow
×
Submit new tools
Share tools covering the current topic. Provide easy-to-follow guidelines to improve their usability.
Share new tools with the community
Sign up for free to promote the availability of bioinformatics tools

Metabolite enrichment analysis software tools | Metabolomics

While many tools exist for performing enrichment analysis of transcriptomic and proteomic data in order to interpret them in biological terms, almost no equivalent tools exist for metabolomic data.Source text:(Chagoyen and Pazos 2011) MBRole:…
MSEA
Web

MSEA Metabolite Set Enrichment Analysis

A web-based tool to help identify and interpret patterns of metabolite…

A web-based tool to help identify and interpret patterns of metabolite concentration changes in a biologically meaningful context for human and mammalian metabolomic studies. Key to the development…

iMet-Q
Desktop

iMet-Q intelligent Metabolomic Quantitation

An automated tool with friendly user interfaces for quantifying metabolites in…

An automated tool with friendly user interfaces for quantifying metabolites in full-scan liquid chromatography-mass spectrometry (LC-MS) data. iMet-Q has a complete quantitation procedure for noise…

zeroSum
Desktop

zeroSum

Allows the transfer of metabolic signatures across labs. zeroSum identifies the…

Allows the transfer of metabolic signatures across labs. zeroSum identifies the same biomarkers regardless of the scaling method. It can be used for small data sets and reduced precision. This tool…

MPEA
Web

MPEA Metabolite Pathway Enrichment Analysis

A rapid tool for functional analysis and biological interpretation of metabolic…

A rapid tool for functional analysis and biological interpretation of metabolic profiling data. MPEA follows the concept of gene set enrichment analysis (GSEA) and tests whether metabolites involved…

ChemRICH
Web

ChemRICH Chemical Similarity Enrichment Analysis

Allows users to realize pathway analysis. ChemRICH is a chemical similarity…

Allows users to realize pathway analysis. ChemRICH is a chemical similarity enrichment analysis software for metabolomics datasets utilizing medical subject headings and Tanimoto substructure…

BiNChE
Web

BiNChE

An enrichment analysis tool for small molecules based on the ChEBI Ontology.…

An enrichment analysis tool for small molecules based on the ChEBI Ontology. BiNChE displays an interactive graph that can be exported as a high-resolution image or in network formats. The tool…

MBRole
Web

MBRole Metabolite Biological Role

Performs overrepresentation (enrichment) analysis of categorical annotations…

Performs overrepresentation (enrichment) analysis of categorical annotations for a set of compounds of interest. These categorical annotations correspond to biological and chemical information…

IMPaLA
Web

IMPaLA

A web tool for the joint pathway analysis of transcriptomics or proteomics and…

A web tool for the joint pathway analysis of transcriptomics or proteomics and metabolomics data. IMPaLA performs over-representation or enrichment analysis with user-specified lists of metabolites…

MetaboliteIDCon…
Desktop

MetaboliteIDConverter

Enriches metabolomic data sets with known databases identifiers.…

Enriches metabolomic data sets with known databases identifiers. MetaboliteIDConverter is a Shell module that allows users to convert Metabolite Identifiers to and from database identifiers. This…

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.