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Metabolomic analysis software tools and databases

Metabolomics can generally be defined as the study of global metabolite profiles in a system (cell, tissue or organism) under a given set of conditionsSource text:(Goodacre et al., 2004) Metabolomics by numbers: acquiring and understanding global metabolite data. Trends Biotechnol.

Metabolomics steps

Experts in Metabolomics

They share and annotate bioinformatics tools

  • Biswapriya Biswavas Misra's avatar image Biswapriya Biswavas Misra's country flag
    Biswapriya Biswavas Misra
    Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, USA

Most recent bioinformatics tools

ARISTO
Web

ARISTO Automatic Reduction of Ion Spectra To Ontology

Allows direct chemical characterization of mass spectra without explicit…

Allows direct chemical characterization of mass spectra without explicit substructure matching. ARISTO is a webtool built on ChEBI, which is an ontology of chemical entities with relevance to…

KCaM
Web

KCaM KEGG Carbohydrate Matcher

Provides a platform allowing comparisons between branched carbohydrate chain…

Provides a platform allowing comparisons between branched carbohydrate chain structures. KCaM permits users to perform two types of matches: (i) an exact match, for aligning bonds with one another…

MWFD
Dataset

MWFD Wheat Fusarium head blight Disease

Collects data about metabolites implicated in resistance to Fusarium head…

Collects data about metabolites implicated in resistance to Fusarium head blight(FHB). MWFD assists users in antifungal compound discovery and the development of resistant wheat varieties. It is a…

ChemRICH
Web

ChemRICH Chemical Similarity Enrichment Analysis

Allows users to realize pathway analysis. ChemRICH is a chemical similarity…

Allows users to realize pathway analysis. ChemRICH is a chemical similarity enrichment analysis software for metabolomics datasets utilizing medical subject headings and Tanimoto substructure…

Most popular analytical software and databases

3Omics
Web

3Omics

Serves for the analysis of human data. 3Omics simplifies the data analysis by…

Serves for the analysis of human data. 3Omics simplifies the data analysis by combining the advantages and operations of several existing systems and packages into a single platform. It accepts…

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