Metabolomic analysis software tools and databases

Metabolomics can generally be defined as the study of global metabolite profiles in a system (cell, tissue or organism) under a given set of conditionsSource text:(Goodacre et al., 2004) Metabolomics by numbers: acquiring and understanding global metabolite data. Trends…

Metabolomics steps

Most recent bioinformatics tools

zeroSum
Desktop

zeroSum

Allows the transfer of metabolic signatures across labs. zeroSum identifies the…

Allows the transfer of metabolic signatures across labs. zeroSum identifies the same biomarkers regardless of the scaling method. It can be used for small data sets and reduced precision. This tool…

PITDB
Dataset

PITDB

Compiles a collection of experimentally observed translated genomic elements…

Compiles a collection of experimentally observed translated genomic elements (TGEs) derived from proteomics informed by transcriptomics (PIT) experiments. PITDB includes a record for each TGE…

PACDB
Dataset

PACDB Pathogen Adherence to Carbohydrate Database

Supplies information about pathogen adherence. PACDB is an online resource that…

Supplies information about pathogen adherence. PACDB is an online resource that offers users to find information by three ways: general search, search by diseases, or search by scientific names.

GlycoNAVI
Dataset

GlycoNAVI

Provides access to carbohydrate research tools. GlycoNAVI is a database of…

Provides access to carbohydrate research tools. GlycoNAVI is a database of chemical reactions that involve carbohydrates and molecules involved in these reactions. The online interface of this…

Most popular analytical software and databases

3Omics
Web

3Omics

A one-click web tool for visualizing and rapidly integrating multiple inter- or…

A one-click web tool for visualizing and rapidly integrating multiple inter- or intra-transcriptomic, proteomic, and metabolomic human data. 3Omics covers and connects cascades from transcripts,…

Curators for Metabolomics

  • Biswapriya Biswavas Misra's avatar image Biswapriya Biswavas Misra's country flag
    Biswapriya Biswavas Misra
    Department of Biology, Genetics…

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