metaCCA statistics

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Associated diseases

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metaCCA specifications

Information


Unique identifier OMICS_09300
Name metaCCA
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Anna Cichonska <>

Publication for metaCCA

metaCCA in publication

PMCID: 5717338
PMID: 29093210
DOI: 10.1098/rsob.170125

[…] between two traits and sets of genetic markers, for example within genes. further development of the method also allowed for multiple gene-multiple phenotype tests []. a recently published method, metacca, performs cca on summary data from single-trait gwas at both a variant- and locus-level (see ยง2.5) []. the use of functional linear models for the analysis of multiple variants and multiple […]


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metaCCA institution(s)
Institute for Molecular Medicine Finland FIMM, University of Helsinki, Helsinki, Finland; Helsinki Institute for Information Technology HIIT, Department of Computer Science, Aalto University, Espoo, Finland; Computational Medicine, University of Oulu, Oulu University Hospital and Biocenter Oulu, Oulu, Finland; NMR Metabolomics Laboratory, School of Pharmacy, University of Eastern Finland, Kuopio, Finland; Department of Clinical Chemistry, Fimlab Laboratories, University of Tampere School of Medicine, Tampere, Finland; Department of Clinical Physiology and Nuclear Medicine, University of Turku and Turku University Hospital, Turku, Finland; Research Centre of Applied and Preventive Cardiovascular Medicine, University of Turku and Department of Clinical Physiology and Nuclear Medicine, Turku University Hospital, Turku, Finland; Department of Epidemiology and Biostatistics, MRC-PHE Centre for Environment & Health, School of Public Health, Imperial College London, London, UK; Centre for Life Course Epidemiology, Faculty of Medicine, University of Oulu, Oulu, Finland; Biocenter Oulu, University of Oulu, Oulu, Finland; Unit of Primary Care, Oulu University Hospital, Oulu, Finland; National Institute for Health and Welfare, Helsinki, Finland; Computational Medicine, School of Social and Community Medicine and the Medical Research Council Integrative Epidemiology Unit, University of Bristol, Bristol, UK; Public Health, University of Helsinki, Helsinki, Finland; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK

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